The detailed information of tRNA gene sequence


Sequence ID>WENV180098178
Genome IDMTBK01232015
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 33563
End posion on genome 33635
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
acaactgtac
tRNA gene sequence 
GGCGCTTTCATCTAACGGTTAGGATACAAGATTCTCAATCTTGGCATACGGGTTCGATTC
CCGTAAGCGCTACaa
Downstream region at tRNA end position 
aaaagtctct
Secondary structure (Cloverleaf model)
>WENV180098178	Glu	CTC
                   c      ACaa aaaagtctct
                     G + T
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A
                     T - A          T T
                    T     T G C C C     A
      C A A        C      | | | | |     G
    G       T C T A       A C G G G     C
    G       + | | |                 T T
    T       G G A T
      T A          A     GCAT
                    C - G
                    A - T
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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