The detailed information of tRNA gene sequence


Sequence ID>WENV180098179
Genome IDMTBK01232057
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 5305
End posion on genome 5395
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ccggaaacag
tRNA gene sequence 
GGAGAGATGCAGGAGTGGTTGAACTGGCTCGCCTGGAAAGCGAGTGTACTCCAAAAGGGT
ACCGGGGGTTCGAATCCCCCTCTCTCCGCCA
Downstream region at tRNA end position 
aactcatcag
Secondary structure (Cloverleaf model)
>WENV180098179	Ser	GGA
                   g      GCCA aactcatcag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G G A C       G G G G G     C
    G         | | |                 T T
    T       A C T G
      T G A        G     TGTACTCCAAAAGGGTACC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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