The detailed information of tRNA gene sequence


Sequence ID>WENV180098182
Genome IDMTBK01232264
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 500
End posion on genome 576
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
acgtaagtta
tRNA gene sequence 
CGGGGAGTAGCGCAGCATGGGAGCGCACTCGCTTGGGGTGCGAGTGGTCGGCGGTTCAAA
TCCGCTCTCCCCGACCA
Downstream region at tRNA end position 
agtcttcagt
Secondary structure (Cloverleaf model)
>WENV180098182	Pro	GGG
                   a      ACCA agtcttcagt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T C G C C     A
      C G A        A      + | | | |     A
    A       C G C G       G G C G G     C
    T       | | | |                 T T
    G       G C G C
      G G A        A     TGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  T       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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