The detailed information of tRNA gene sequence


Sequence ID>WENV180098187
Genome IDMTBK01232328
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 4911
End posion on genome 4987
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gattgaatgc
tRNA gene sequence 
GGGGTCGTAGCTCAGTTGGTTAGAGTGCCGGCCTGTCACGCCGGAGGTCGCGAGTTCGAG
TCTCGTCGGCCCCGCCA
Downstream region at tRNA end position 
ttataatcct
Secondary structure (Cloverleaf model)
>WENV180098187	Asp	GTC
                   c      GCCA ttataatcct
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     G - C          T G
                    T     T G C T C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G A G     C
    G       | | | +                 T T
    G       G A G T
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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