The detailed information of tRNA gene sequence


Sequence ID>WENV180098192
Genome IDMTBK01232328
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 47551
End posion on genome 47645
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgctgtcctt
tRNA gene sequence 
GGTGGGTTGGCCGAGTAGGTCGAAGGCGCTCGCCTGCTAAGCGAGTAGGGGGGCCCAAAC
CTCCCTCGAGGGTTCGAATCCCTCACCCACCGCCA
Downstream region at tRNA end position 
ttttcgaggt
Secondary structure (Cloverleaf model)
>WENV180098192	Ser	GCT
                   t      GCCA ttttcgaggt
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     C T C C C     A
    A T G A        G      | | | | |     G
  G         G C C G       G A G G G     C
  G           | | |                 T T
  T         A G G C
    C G A          G     TAGGGGGGCCCAAACCTCCCTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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