The detailed information of tRNA gene sequence


Sequence ID>WENV180098195
Genome IDMTBK01232448
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 481
End posion on genome 393
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
ttctgggcgt
tRNA gene sequence 
GCCGAAGTGGCGGAATTGGCAGACGCGCTGGACTCAAACTCCAGTGAGGCTCACACCTCG
TGCGGGTTCGACCCCCGCCTTCGGCACCA
Downstream region at tRNA end position 
ttttcctgcg
Secondary structure (Cloverleaf model)
>WENV180098195	Leu	CAA
                   t      ACCA ttttcctgcg
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          C C
                    T     C G C C C     A
      T A A        G      | | | | |     G
    T       G G C G       G C G G G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TGAGGCTCACACCTCGT
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       C
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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