The detailed information of tRNA gene sequence


Sequence ID>WENV180098197
Genome IDMTBK01232695
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 486
End posion on genome 560
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ggaagcagat
tRNA gene sequence 
AGGCCAATAGCTCCAATTGGTAGAGCGCTGGTCTCCAAAACCAGATGTTGAGGGTTCGAG
TCCTTCTTGGCCTGCtt
Downstream region at tRNA end position 
gcttctcaat
Secondary structure (Cloverleaf model)
>WENV180098197	Trp	CCA
                   t      GCtt gcttctcaat
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T          T G
                    T     C T T C C     A
      A A C        A      | | + | |     G
    T       C T C G       G A G G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     ATGTT
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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