The detailed information of tRNA gene sequence


Sequence ID>WENV180098203
Genome IDMTBK01233100
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1675
End posion on genome 1751
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tatctgctgc
tRNA gene sequence 
GGCGGAGTACCTCAGTTGGTTAGAGGACCCGGCTCATACCCGGGGCGTCGTCGGTTCGAG
CCCGACCTCCGCTACCA
Downstream region at tRNA end position 
ttccgcatct
Secondary structure (Cloverleaf model)
>WENV180098203	Met	CAT
                   c      ACCA ttccgcatct
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          C G
                    T     C A G C C     A
      T G A        A      | | | | |     G
    T       C T C C       G T C G G     C
    G       | | | |                 T T
    G       G A G G
      T T A        A     GCGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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