The detailed information of tRNA gene sequence


Sequence ID>WENV180098212
Genome IDMTBK01233643
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 214
End posion on genome 124
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aattcaatct
tRNA gene sequence 
GGGGAGGTGCCAGAGTGGTTGATTGGGGCCGCCTGCTAAGTGGTTGTTGGGTTTGTAGCT
CAACCGGGGGTTCGAATCCCCCCCTCCCCGCtg
Downstream region at tRNA end position 
aaacgaacag
Secondary structure (Cloverleaf model)
>WENV180098212	Ser	GCT
                   t      GCtg aaacgaacag
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G A C C       G G G G G     C
    G       + | | |                 T T
    T       T T G G
      T G A        G     TGTTGGGTTTGTAGCTCAACC
                    G + T
                    C - G
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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