The detailed information of tRNA gene sequence


Sequence ID>WENV180098213
Genome IDMTBK01233711
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 7099
End posion on genome 7174
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
atttacacgc
tRNA gene sequence 
GGAGCTGTGGTGTAGCGGTTAACATGCCGGCCTGTCACGCCGGAGATCGCGGGTTCAATT
CCCGTCAGCTCCGCCA
Downstream region at tRNA end position 
ttttttgccg
Secondary structure (Cloverleaf model)
>WENV180098213	Asp	GTC
                   c      GCCA ttttttgccg
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     T - A
                     G - C          T T
                    T     T G C C C     A
      C G A        G      + | | | |     A
    G       T G T G       G C G G G     C
    G       | | | +                 T T
    T       A C A T
      T A          G     AGATC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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