The detailed information of tRNA gene sequence


Sequence ID>WENV180098225
Genome IDMTBK01234375
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 646
End posion on genome 735
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
acgctttcgt
tRNA gene sequence 
GGAGAGGTGACCGAGTGGCCGAAGGTGGCGCCCTGCTAAGGCGTTGTGCGGGCAACCGTA
CCCCGGGTTCGAATCCCGGCCTCTCCGCCA
Downstream region at tRNA end position 
tccttcttct
Secondary structure (Cloverleaf model)
>WENV180098225	Ser	GCT
                   t      GCCA tccttcttct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G G C C C     A
      T G A        G      | | | | |     G
    G       G C C A       C C G G G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TGTGCGGGCAACCGTACC
                    G + T
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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