The detailed information of tRNA gene sequence


Sequence ID>WENV180098226
Genome IDMTBK01234417
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 9
End posion on genome 80
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
nncacggctt
tRNA gene sequence 
GCCAAGGTGGCGGAGCGGCCACGCGGTTGACTGCAGATCAACTACACCCCGGTTCAAATC
CGGGCCTTGGCTtcc
Downstream region at tRNA end position 
atccggtttc
Secondary structure (Cloverleaf model)
>WENV180098226	Cys	GCA
                   t      Ttcc atccggtttc
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     G G G C C     A
        G A        G      | | | | |     A
      C     G G C G       C C C G G     C
      G       | | |                 T T
      G     A C G C
        C C        G     TACAC
                    G - C
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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