The detailed information of tRNA gene sequence


Sequence ID>WENV180098229
Genome IDMTBK01234737
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1059
End posion on genome 984
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
ttttgtttta
tRNA gene sequence 
GGGCCCATAGCTCAGCTGGTTAGAGCACCTGACTCATAATCAGGGGGTCGCTGGTTCAAG
CCCAGCTGGGCCCACCc
Downstream region at tRNA end position 
cactataaga
Secondary structure (Cloverleaf model)
>WENV180098229	Ile2	CAT
                   a      ACCc cactataaga
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          C G
                    T     C G A C C     A
      C G A        A      | | | | |     A
    T       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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