The detailed information of tRNA gene sequence


Sequence ID>WENV180098233
Genome IDMTBK01235062
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 22656
End posion on genome 22753
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position
ggattctgaa
tRNA gene sequence
GGAAGTGCCAAGGTCACTGGTGGGCCTCCCGGACTTCAAATCCGGTGTGGGGCGCTAGAA
CCGTCCCAGGTGGGTTCGATTCCCATGCACTTCCGCCA
Downstream region at tRNA end position
ttttattagc
Secondary structure (Cloverleaf model)
>WENV180098233	SeC	TCA
                   a      GCCA ttttattagc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     C - G          T T
                    C     T A C C C     A
      C A C        A      + | | | |     G
    T       T G G A       G T G G G     C
    G       + | | |                 T T
    G       G C C T
      T G G        C     TGTGGGGCGCTAGAACCGTCCCAG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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