The detailed information of tRNA gene sequence


Sequence ID>WENV180098234
Genome IDMTBK01235062
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 62755
End posion on genome 62848
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aataaaatgc
tRNA gene sequence 
GGAGAGATGTCTGAGAGGCCGAAGGAGCACGACTGGAAATCGTGTGTACGCCCACAAAGG
TGTACCGCGGGTTCGAATCCCGCTCTCTCCGCCA
Downstream region at tRNA end position 
ttttaaatcg
Secondary structure (Cloverleaf model)
>WENV180098234	Ser	GGA
                   c      GCCA ttttaaatcg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C G C C C     A
      A G A        G      | | | | |     G
    G       G T C T       G C G G G     C
    G         + | |                 T T
    C       A G G A
      C G A        G     TGTACGCCCACAAAGGTGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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