The detailed information of tRNA gene sequence


Sequence ID>WENV180098235
Genome IDMTBK01235062
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 62922
End posion on genome 63015
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
catattgcac
tRNA gene sequence 
GGAGAGTTACCGAAGTGGTCGTAACGGGATCGACTCGAAATCGATTTAGGGGCCACAAGC
TCCTACGGGGGTTCGAATCCCCCACTCTCCGCCA
Downstream region at tRNA end position 
gttgatcatc
Secondary structure (Cloverleaf model)
>WENV180098235	Ser	CGA
                   c      GCCA gttgatcatc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C C C C C     A
    G T G A        A      | | | | |     G
  G         A G C C       G G G G G     C
  T           | | |                 T T
  C         A C G G
    G T A          G     TTAGGGGCCACAAGCTCCTAC
                    A - T
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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