The detailed information of tRNA gene sequence


Sequence ID>WENV180098239
Genome IDMTBK01235129
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1290
End posion on genome 1363
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
tgcagcacga
tRNA gene sequence 
GGCCCCGTTGTGTAGTGGCCTAGCACGCCGCCCTCTCAAGGCGGTAGCGCGGGTTCGAAT
CCCGTCGGGGCTACaa
Downstream region at tRNA end position 
aagccaaacc
Secondary structure (Cloverleaf model)
>WENV180098239	Glu	CTC
                   a      ACaa aagccaaacc
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T G C C C     A
      T G A        T      + | | | |     G
    G       T G T G       G C G G G     C
    G       + | | |                 T T
    C       G C A C
      C T A        G     TAGC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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