The detailed information of tRNA gene sequence


Sequence ID>WENV180098253
Genome IDMTBK01235544
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 27995
End posion on genome 28068
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
accgaaaccg
tRNA gene sequence 
AGGGGCGTAGCTCAACTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCAAGT
CCTGTCGCCCCTGCtc
Downstream region at tRNA end position 
aattgaatag
Secondary structure (Cloverleaf model)
>WENV180098253	Trp	CCA
                   g      GCtc aattgaatag
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     T G T C C     A
      C A A        A      + | | | |     A
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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