The detailed information of tRNA gene sequence


Sequence ID>WENV180098254
Genome IDMTBK01235614
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2647
End posion on genome 2575
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
ttatatacat
tRNA gene sequence 
GCTACTGTGGCGCAGCAGGCAGCGCAACTGATTCGTAATCAGTAGGTCAGGGGTTCGAAT
CCCCTCAGTAGCTttt
Downstream region at tRNA end position 
ttattaaaag
Secondary structure (Cloverleaf model)
>WENV180098254	Thr	CGT
                   t      Tttt ttattaaaag
                     G - C
                     C - G
                     T - A
                     A - T
                     C - G
                     T - A
                     G - C          T A
                    T     T C C C C     A
      C G A        G      | | | | |     G
    A       C G C G       A G G G G     C
    G       | | | |                 T T
    G       G C G C
      C A          A     AGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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