The detailed information of tRNA gene sequence


Sequence ID>WENV180098255
Genome IDMTBK01235614
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2485
End posion on genome 2411
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
atacactttT
tRNA gene sequence 
GGGGATATAGCTCAGTTGGGAGAGTGCTTGAATGGCATTCAAGAGGCCAGGGGTTCGAGA
CCCCTTATCTCCATtt
Downstream region at tRNA end position 
attgcgggtg
Secondary structure (Cloverleaf model)
>WENV180098255	Ala	GGC
                   T      ATtt attgcgggtg
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     A - T          A G
                    T     T C C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | +                 T T
    G       G A G T
      G A          G     AGGCC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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