The detailed information of tRNA gene sequence


Sequence ID>WENV180098257
Genome IDMTBK01235657
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 459
End posion on genome 384
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
cagaaaatgg
tRNA gene sequence 
CGCGGGGTGGAGCAGCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGCGGGTTCGACT
CCCGCCCCCGCTACCA
Downstream region at tRNA end position 
atattccata
Secondary structure (Cloverleaf model)
>WENV180098257	fMet	CAT
                   g      ACCA atattccata
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T C
                    T     C G C C C     A
      C G A        G      | | | | |     G
    T       C G A G       G C G G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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