The detailed information of tRNA gene sequence


Sequence ID>WENV180098262
Genome IDMTBK01235861
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 474
End posion on genome 389
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aaatggtgag
tRNA gene sequence 
GGAGGATTAGTCCTAATTGGTAAGGCAGCGGTCTTGAAAACCGCCGGGTTTTACCCATGG
GGGTTCGAGTCCCTCATCCTCCGCCA
Downstream region at tRNA end position 
gtaaatatag
Secondary structure (Cloverleaf model)
>WENV180098262	Ser	TGA
                   g      GCCA gtaaatatag
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T G
                    T     C T C C C     A
      A A T        A      | + | | |     G
    T       C C T G       G G G G G     C
    T         | + |                 T T
    G       A G G C
      G T A        A     CGGGTTTTACCCAT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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