The detailed information of tRNA gene sequence


Sequence ID>WENV180098273
Genome IDMTBK01236296
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 48
End posion on genome 123
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tcagtattct
tRNA gene sequence 
ACGGGAGTGGCTCAATTGGTAGAGCACCGGACTCCAAATCCGGCGGTTGTGGGTTCGATT
CCTACCTCCCGTGCCA
Downstream region at tRNA end position 
gcaaacaagc
Secondary structure (Cloverleaf model)
>WENV180098273	Trp	CCA
                   t      GCCA gcaaacaagc
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T T
                    T     C A T C C     A
      T A A        G      | | + | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     CGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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