The detailed information of tRNA gene sequence


Sequence ID>WENV180098277
Genome IDMTBK01236660
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 102
End posion on genome 176
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ttatataaat
tRNA gene sequence 
GGGCCATTAGCTCAGCTGGCTAGAGCGCTTCCATGGCATGGAAGAGGCCAAGGGTTCAAA
TCCCTTATGGTCCACaa
Downstream region at tRNA end position 
ccctcatctt
Secondary structure (Cloverleaf model)
>WENV180098277	Ala	GGC
                   t      ACaa ccctcatctt
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     A - T
                     T - A          T A
                    T     T T C C C     A
      C G A        A      | | | | |     A
    T       C T C G       A A G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGCC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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