The detailed information of tRNA gene sequence


Sequence ID>WENV180098279
Genome IDMTBK01236887
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 3905
End posion on genome 3832
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
tcgggagata
tRNA gene sequence 
GGGCTCATAGTTCAATTGGCAGAACACCGCATTCGCATTGCGAAGGTTGCCGGTTCAACT
CCGGCTGAGTCCACtt
Downstream region at tRNA end position 
gtttagggcc
Secondary structure (Cloverleaf model)
>WENV180098279	Ala	CGC
                   a      ACtt gtttagggcc
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     C - G
                     A - T          T C
                    T     C G G C C     A
      T A A        A      | | | | |     A
    T       C T T G       G C C G G     C
    G       | | | |                 T T
    G       G A A C
      C A          A     AGGTT
                    C   A
                    C - G
                    G - C
                    C - G
                    A - T
                  T       T
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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