The detailed information of tRNA gene sequence


Sequence ID>WENV180098297
Genome IDMTBK01237948
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2715
End posion on genome 2628
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ctctcccgcc
tRNA gene sequence 
GGAGGGGTGGCAGAGTGGTCGATTGCGGCGGTCTTGAAAACCGTTGGCCCGCAAGGGCCC
AGGGGTTCGAATCCCCTCCCCTCCGCCA
Downstream region at tRNA end position 
gcggccagtg
Secondary structure (Cloverleaf model)
>WENV180098297	Ser	TGA
                   c      GCCA gcggccagtg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T C C C C     A
      T G A        G      | | | | |     G
    G       G A C G       A G G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     TGGCCCGCAAGGGCCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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