The detailed information of tRNA gene sequence


Sequence ID>WENV180098306
Genome IDMTBK01238427
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 471
End posion on genome 397
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tgacttgaat
tRNA gene sequence 
GGCGCGGTAGCCAAGTGGTAAGGCGAGGGTCTGCAAAATCCTTATGCATCGGTTCGATCC
CGATCCGCGCCTCCA
Downstream region at tRNA end position 
attgcctttg
Secondary structure (Cloverleaf model)
>WENV180098306	Cys	GCA
                   t      TCCA attgcctttg
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          C T
                    T     T A G C C     A
        G A        A      | | | | |     G
      T     A C C G       A T C G G     C
      G       | | |                 T T
      G     A G G C
        T A        G     TATGC
                    A - T
                    G - C
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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