The detailed information of tRNA gene sequence


Sequence ID>WENV180098308
Genome IDMTBK01238520
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 326
End posion on genome 419
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgggggttgg
tRNA gene sequence 
GGAGGCGTCGCCTAGTCTGGTCTATGGCGCCCGCCTGCTAAGCGGGTTTCGGGGTTATTC
CCGATCGTGGGTTCAAATCCCACCGCCTCCGCCA
Downstream region at tRNA end position 
cgtgatgtcg
Secondary structure (Cloverleaf model)
>WENV180098308	Ser	GCT
                   g      GCCA cgtgatgtcg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C A C C C     A
    C T G A        C      | | | | |     A
  T         T C C G       G T G G G     C
  G           | | |                 T T
  G         T G G C
    T C T A        G     TTTCGGGGTTATTCCCGATC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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