The detailed information of tRNA gene sequence


Sequence ID>WENV180098309
Genome IDMTBK01238669
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2408
End posion on genome 2479
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tgttgcagtt
tRNA gene sequence 
GGTACCTTGACCGAGCGGCTAGGTATCGGTCTGCAAAACCGAGAACGGCGGTTCGAATCC
GCCAGGTACCTCaa
Downstream region at tRNA end position 
agagacctcc
Secondary structure (Cloverleaf model)
>WENV180098309	Cys	GCA
                   t      TCaa agagacctcc
                     G - C
                     G - C
                     T - A
                     A - T
                     C - G
                     C - G
                     T - A          T A
                    T     C C G C C     A
        G A        G      | | | | |     G
      C     G C C A       G G C G G     C
      G       | | |                 T T
      G     A G G T
        C T        A     GAAC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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