The detailed information of tRNA gene sequence


Sequence ID>WENV180098315
Genome IDMTBK01238924
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1046
End posion on genome 971
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
ataggatgac
tRNA gene sequence 
GCTGGGGTAGCTCAGCAGGCAGAGCACGTCCTTGGTAAGGACGAGGTCGGCGGTTCGAGC
CCGCTCCCCAGCTCCA
Downstream region at tRNA end position 
atttgtcaaa
Secondary structure (Cloverleaf model)
>WENV180098315	Thr	GGT
                   c      TCCA atttgtcaaa
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C          C G
                    T     T C G C C     A
      C G A        A      + | | | |     G
    A       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTC
                    C - G
                    G - C
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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