The detailed information of tRNA gene sequence


Sequence ID>WENV180098323
Genome IDMTBK01239244
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 3635
End posion on genome 3709
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
tccgtcttcT
tRNA gene sequence 
GGGTCCATAGCTCAGCGGTCAGAGCACCCGGCTCATAACCGGAGGGTCCCTGGTTCGAAT
CCAGGTGGGCCCATgc
Downstream region at tRNA end position 
cgtcgcgccc
Secondary structure (Cloverleaf model)
>WENV180098323	Ile2	CAT
                   T      ATgc cgtcgcgccc
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     C - G
                     A - T          T A
                    T     G G A C C     A
      C G A        A      | | | | |     G
    G       C T C G       C C T G G     C
    G       | | | |                 T T
    T       G A G C
      C A          A     GGGTC
                    C   A
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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