The detailed information of tRNA gene sequence


Sequence ID>WENV180098324
Genome IDMTBK01239315
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 6055
End posion on genome 6131
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position
acgacggtaa
tRNA gene sequence
CGGGAAGTGGCTCAGCCTGGTAGAGCACAGCGTTCGGGACGCTGGGGTCCGGGGTTCAAA
TCCCCGCTTCCCGACCA
Downstream region at tRNA end position
gtttgcaatt
Secondary structure (Cloverleaf model)
>WENV180098324	Pro	CGG
                   a      ACCA gtttgcaatt
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     G C C C C     A
      C G A        G      | | | | |     A
    C       C T C G       C G G G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GGGTC
                    C - G
                    A - T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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