The detailed information of tRNA gene sequence


Sequence ID>WENV180098326
Genome IDMTBK01239324
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 137
End posion on genome 212
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tacgtagtat
tRNA gene sequence 
GGGCCGTTAGCTTAGTCGGTAGAGCGCTTCCATGGCATGGAAGAGGTCAGCGGTTCGAAT
CCGCTACGGTCCACCA
Downstream region at tRNA end position 
ttgaaattaa
Secondary structure (Cloverleaf model)
>WENV180098326	Ala	GGC
                   t      ACCA ttgaaattaa
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     T C G C C     A
      T G A        A      | | | | |     G
    C       T T C G       A G C G G     C
    G       + | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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