The detailed information of tRNA gene sequence


Sequence ID>WENV180098331
Genome IDMTBK01239666
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 541
End posion on genome 455
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
atctcactaa
tRNA gene sequence 
GCCCAAGTGGCGGAATTGGTAGACGCGCAACGTTCAGGTCGTTGTGTTCGTAAGAACGTG
GAGGTTCAAATCCTCTCTTGGGCACCA
Downstream region at tRNA end position 
agataaactc
Secondary structure (Cloverleaf model)
>WENV180098331	Leu	CAG
                   a      ACCA agataaactc
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     A - T
                     G - C          T A
                    T     T C T C C     A
      T A A        G      + | | | |     A
    T       G G C G       G G A G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGTTCGTAAGAACGT
                    C - G
                    A - T
                    A - T
                    C - G
                    G - C
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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