The detailed information of tRNA gene sequence


Sequence ID>WENV180098332
Genome IDMTBK01239697
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 642
End posion on genome 567
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cccagaatgc
tRNA gene sequence 
AGGCCCGTAGCTCCAACGGTAGAGCGGCGGTCTCCAAAACCGATGGCTGGGGGTTCGAAT
CCCTCCGGGCCTGCCA
Downstream region at tRNA end position 
taaactttca
Secondary structure (Cloverleaf model)
>WENV180098332	Trp	CCA
                   c      GCCA taaactttca
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C T C C C     A
      A A C        A      | + | | |     G
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     TGGCT
                    G   A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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