The detailed information of tRNA gene sequence


Sequence ID>WENV180098334
Genome IDMTBK01239718
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1668
End posion on genome 1744
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaagaaaagt
tRNA gene sequence 
GGCGGTGTAGCTCAGCTGGTTAGAGCGTCGGAATCATAATCCGCAGGTCCGGGGTTCAAA
TCCCTGCGCCGCTACCA
Downstream region at tRNA end position 
ttttttttgc
Secondary structure (Cloverleaf model)
>WENV180098334	Met	CAT
                   t      ACCA ttttttttgc
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     G T C C C     A
      C G A        A      | + | | |     A
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T   C
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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