The detailed information of tRNA gene sequence


Sequence ID>WENV180098337
Genome IDMTBK01239852
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1401
End posion on genome 1327
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
acgcccgcgc
tRNA gene sequence 
GGGGCTGTAGCTCAGTTGGCAGAGCGCTTCCATGGCATGGAAGAGGTCAGGGGTTCAATT
CCCCTCAGCTCCACCc
Downstream region at tRNA end position 
caagcaccat
Secondary structure (Cloverleaf model)
>WENV180098337	Ala	GGC
                   c      ACCc caagcaccat
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T T
                    T     T C C C C     A
      T G A        A      | | | | |     A
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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