The detailed information of tRNA gene sequence


Sequence ID>WENV180098338
Genome IDMTBK01239890
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1024
End posion on genome 1099
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
gaaaaggagc
tRNA gene sequence 
GGGCCTATAGCTCAACTGGTAGAGCCACCGGCTCATAACCGGTAGGTCCCTGGTTCGACT
CCAGGTGGGCCCACCA
Downstream region at tRNA end position 
gacccaacaa
Secondary structure (Cloverleaf model)
>WENV180098338	Ile2	CAT
                   c      ACCA gacccaacaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T C
                    T     G G A C C     A
      C A A        A      | | | | |     G
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          C     AGGTC
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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