The detailed information of tRNA gene sequence


Sequence ID>WENV180098339
Genome IDMTBK01240046
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1744
End posion on genome 1670
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
atagggcgat
tRNA gene sequence 
GCCGGCATAGCTCAATTGGCAGAGCAGCTGAATCGTAATCAGCATGTTGGGGTTCGAGTC
CTCTTGCCGGCTCCA
Downstream region at tRNA end position 
tgaaaaatcc
Secondary structure (Cloverleaf model)
>WENV180098339	Thr	CGT
                   t      TCCA tgaaaaatcc
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     C - G
                     A - T          T G
                    T     T C T C C     A
      T A A        A        | + | |     G
    T       C T C G       T G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     ATGT
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  A       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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