The detailed information of tRNA gene sequence


Sequence ID>WENV180098342
Genome IDMTBK01240417
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 9890
End posion on genome 9817
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
cagcgcgtct
tRNA gene sequence 
GGGGCTATGGCGCAGCTGGTAGCGCACCACACTGGCAGTGTGGGGGTCAGGGGTTCGAGT
CCCCTTAGCTCCACaa
Downstream region at tRNA end position 
gcaaaacccg
Secondary structure (Cloverleaf model)
>WENV180098342	Ala	GGC
                   t      ACaa gcaaaacccg
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          T G
                    T     T C C C C     A
      C G A        G      | | | | |     G
    T       C G C G       A G G G G     C
    G       | | | |                 T T
    G       G C G C
      T A          A     GGGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    A - T
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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