The detailed information of tRNA gene sequence


Sequence ID>WENV180098354
Genome IDMTBK01240775
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 884
End posion on genome 960
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
acccgttggg
tRNA gene sequence 
CGGGACGTAGCTTAGCCTGGCAGAGCGCTTGCTTTGGGAGCAAGAGGTCGAGAGTTCGAA
TCTCTCCGTCCCGACCA
Downstream region at tRNA end position 
tgtgcagagc
Secondary structure (Cloverleaf model)
>WENV180098354	Pro	TGG
                   g      ACCA tgtgcagagc
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C T C     A
      C G A        A      | | | | |     G
    C       T T C G       G A G A G     C
    T       + | | |                 T T
    G       G A G C
      G C A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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