The detailed information of tRNA gene sequence


Sequence ID>WENV180098361
Genome IDMTBK01241151
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1024
End posion on genome 950
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
accagttcgc
tRNA gene sequence 
GACCCCTTCGTCTATCGGTCAGGACTCAAGATTTTCATTCTTGCAAGAGGGGTTCGATTC
CCCTAGGGGTCGCCA
Downstream region at tRNA end position 
tttttttaaa
Secondary structure (Cloverleaf model)
>WENV180098361	Glu	TTC
                   c      GCCA tttttttaaa
                     G - C
                     A - T
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     T C C C C     A
      C T A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      C A          T     CAAG
                    C - G
                    A - T
                    A - T
                    G - C
                    A - T
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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