The detailed information of tRNA gene sequence


Sequence ID>WENV180098369
Genome IDMTBK01241314
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 524
End posion on genome 439
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cagtatataa
tRNA gene sequence 
GGGAAGGTGTCCGAGTGGTTTATGGTGCATCCCTGCTAAGGATGTGTAGGTTAATCCTAC
CGTAGGTTCAAATCCTACCCTTCCCGttt
Downstream region at tRNA end position 
tgatatttaa
Secondary structure (Cloverleaf model)
>WENV180098369	Ser	GCT
                   a      Gttt tgatatttaa
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     C A T C C     A
      T G A        G      | | | | |     A
    G       G C C T       G T A G G     C
    G       + | |                   T T
    T       T G G T
      T T A        G     TGTAGGTTAATCCTACC
                    C - G
                    A - T
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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