The detailed information of tRNA gene sequence


Sequence ID>WENV180098371
Genome IDMTBK01241317
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 110
End posion on genome 185
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tccagtttaa
tRNA gene sequence 
GGGGATGTAGCTCAGTTGGGAGAGCGCCTGCCTTGCACGCAGGAGGCCAGCGGTTCGAGC
CCGCTCATCTCCACCA
Downstream region at tRNA end position 
cctgttcttt
Secondary structure (Cloverleaf model)
>WENV180098371	Ala	TGC
                   a      ACCA cctgttcttt
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     G - C          C G
                    T     T C G C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGCC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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