The detailed information of tRNA gene sequence


Sequence ID>WENV180098372
Genome IDMTBK01241514
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 36
End posion on genome 125
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gcgtgagcac
tRNA gene sequence 
GGAGAGCTGGCCGAGTGGTTGAAGGCAGCGGTTTTGAAAACCGCCGTAGGTGCAAGCCTA
CCGGGGGTTCGAATCCCTCGCTCTCCGCCA
Downstream region at tRNA end position 
tatgacaggc
Secondary structure (Cloverleaf model)
>WENV180098372	Ser	TGA
                   c      GCCA tatgacaggc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     C - G          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        A     CGTAGGTGCAAGCCTACC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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