The detailed information of tRNA gene sequence


Sequence ID>WENV180098376
Genome IDMTBK01241908
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 917
End posion on genome 988
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
tattatttaa
tRNA gene sequence 
CGCGGGGTAGAGCAGTGGAAGCTCGTCAGGCTCATAACCTGGAGGTCGTCGGTTCGAATC
CGACCCCCGCAAttc
Downstream region at tRNA end position 
atcaccttgt
Secondary structure (Cloverleaf model)
>WENV180098376	fMet	CAT
                   a      Attc atcaccttgt
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A G C C     A
        G A        A      | | | | |     G
      T     C G A G       G T C G G     C
      G     | | | |                 T T
      G     G C T C
        A A        G     AGGTC
                    T + G
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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