The detailed information of tRNA gene sequence


Sequence ID>WENV180098380
Genome IDMTBK01242113
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 3573
End posion on genome 3498
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
actagcggaa
tRNA gene sequence 
AGGGGAGTAGCTCAACGGGAAGAGCAACGGTCTCCAAAACCGTAGGCTGCGGGTTCGAGT
CCTGTCTCCCCTGCCA
Downstream region at tRNA end position 
gtacaaccgc
Secondary structure (Cloverleaf model)
>WENV180098380	Trp	CCA
                   a      GCCA gtacaaccgc
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     T G T C C     A
      C A A        A      + | + | |     G
    G       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      A A          A     AGGCT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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