The detailed information of tRNA gene sequence


Sequence ID>WENV180098381
Genome IDMTBK01242153
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 233
End posion on genome 309
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
cacttagcgt
tRNA gene sequence 
CGGGGAGTGGCGCAGGTTGGTAGCGCGCATGGTTTGGGACCATGAGGTCGCAGGTTCAAA
TCCTGTCTCCCCGACCA
Downstream region at tRNA end position 
tctcatttgt
Secondary structure (Cloverleaf model)
>WENV180098381	Pro	TGG
                   t      ACCA tctcatttgt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T G T C C     A
      G G A        G      + | | | |     A
    T       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    C - G
                    A - T
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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