The detailed information of tRNA gene sequence


Sequence ID>WENV180098384
Genome IDMTBK01242417
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1132
End posion on genome 1208
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
acgcaattat
tRNA gene sequence 
GCGCCGTTAGCTCAATTGGATAGAGCGTCTGACTTCGGATCAGAAGGCTAGGGGTTCAAG
TCCTCTACGGCGCGCCA
Downstream region at tRNA end position 
tnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV180098384	Arg	TCG
                   t      GCCA tnnnnnnnnn
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A          T G
                    T     T C T C C     A
      T A A        A      | | + | |     A
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     AGGCT
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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