The detailed information of tRNA gene sequence


Sequence ID>WENV180098388
Genome IDMTBK01242789
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 11273
End posion on genome 11201
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
tacttctcaa
tRNA gene sequence 
TGCGGGGTAGAGCAGTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCCTTGGTTCGAATC
CAAGCCCCGCTACtg
Downstream region at tRNA end position 
agaaggaacc
Secondary structure (Cloverleaf model)
>WENV180098388	fMet	CAT
                   a      ACtg agaaggaacc
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G A A C C     A
        G A        A      | | | | |     G
      T     C G A G       C T T G G     C
      G     | | | |                 T T
      G     G C T C
        T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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